General Information of Target

Target ID LDTP03243
Target Name Histone H2B type 1-O (H2BC17)
Gene Name H2BC17
Gene ID 8348
Synonyms
H2BFH; H2BFN; HIST1H2BO; Histone H2B type 1-O; H2B-clustered histone 17; Histone H2B.2; Histone H2B.n; H2B/n
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
KYTSSK
Target Bioclass
Other
Family
Histone H2B family
Subcellular location
Nucleus
Function
Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
Uniprot ID
P23527
Ensemble ID
ENST00000616182.2
HGNC ID
HGNC:4758

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 3 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
HHS-475
 Probe Info 
Y84(1.13)  LDD0264  [1]
HHS-465
 Probe Info 
Y84(2.95)  LDD2237  [2]
ATP probe
 Probe Info 
K35(0.00); K6(0.00)  LDD0199  [3]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0116  HHS-0101 DM93 Y84(1.13)  LDD0264  [1]
 LDCM0117  HHS-0201 DM93 Y84(1.00)  LDD0265  [1]
 LDCM0118  HHS-0301 DM93 Y84(1.27)  LDD0266  [1]
 LDCM0119  HHS-0401 DM93 Y84(1.26)  LDD0267  [1]
 LDCM0120  HHS-0701 DM93 Y84(1.74)  LDD0268  [1]

The Interaction Atlas With This Target

The Protein(s) Related To This Target

Other
Click To Hide/Show 1 Protein(s) Interacting with This Target
Protein name Family Uniprot ID
Protocadherin beta-12 (PCDHB12) . Q9Y5F1

References

1 Discovery of a Cell-Active SuTEx Ligand of Prostaglandin Reductase 2. Chembiochem. 2021 Jun 15;22(12):2134-2139. doi: 10.1002/cbic.202000879. Epub 2021 Apr 29.
2 Global targeting of functional tyrosines using sulfur-triazole exchange chemistry. Nat Chem Biol. 2020 Feb;16(2):150-159. doi: 10.1038/s41589-019-0404-5. Epub 2019 Nov 25.
3 Targeted Proteomic Approaches for Proteome-Wide Characterizations of the AMP-Binding Capacities of Kinases. J Proteome Res. 2022 Aug 5;21(8):2063-2070. doi: 10.1021/acs.jproteome.2c00225. Epub 2022 Jul 12.