General Information of Target

Target ID LDTP01624
Target Name Pantetheine hydrolase VNN2 (VNN2)
Gene Name VNN2
Gene ID 8875
Synonyms
Pantetheine hydrolase VNN2; EC 3.5.1.92; Glycosylphosphatidyl inositol-anchored protein GPI-80; Protein FOAP-4; Vascular non-inflammatory molecule 2; Vanin-2
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MVTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDI
LETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHRFGHTP
VQARLSCLAKDNSIYVLANLGDKKPCNSRDSTCPPNGYFQYNTNVVYNTEGKLVARYHKY
HLYSEPQFNVPEKPELVTFNTAFGRFGIFTCFDIFFYDPGVTLVKDFHVDTILFPTAWMN
VLPLLTAIEFHSAWAMGMGVNLLVANTHHVSLNMTGSGIYAPNGPKVYHYDMKTELGKLL
LSEVDSHPLSSLAYPTAVNWNAYATTIKPFPVQKNTFRGFISRDGFNFTELFENAGNLTV
CQKELCCHLSYRMLQKEENEVYVLGAFTGLHGRRRREYWQVCTLLKCKTTNLTTCGRPVE
TASTRFEMFSLSGTFGTEYVFPEVLLTEIHLSPGKFEVLKDGRLVNKNGSSGPILTVSLF
GRWYTKDSLYSSCGTSNSAITYLLIFILLMIIALQNIVML
Target Bioclass
Enzyme
Family
Carbon-nitrogen hydrolase superfamily, BTD/VNN family
Subcellular location
Cell membrane
Function
Amidohydrolase that hydrolyzes specifically one of the carboamide linkages in D-pantetheine thus recycling pantothenic acid (vitamin B5) and releasing cysteamine. Involved in the thymus homing of bone marrow cells. May regulate beta-2 integrin-mediated cell adhesion, migration and motility of neutrophil.
Uniprot ID
O95498
Ensemble ID
ENST00000326499.11
HGNC ID
HGNC:12706

Target Site Mutations in Different Cell Lines

Cell line Mutation details Probe for labeling this protein in this cell
AN3CA SNV: p.A175S .
HCT15 SNV: p.Q23H .
KYSE410 SNV: p.P219S .
MDST8 SNV: p.S4F .
MOLT4 SNV: p.A68T .
NCIH1703 SNV: p.K376R .
SUPT1 SNV: p.T325N .
UACC257 SNV: p.S126G .

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 1 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
BTD
 Probe Info 
C415(0.93)  LDD2090  [1]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0519  1-(6-methoxy-3,4-dihydroquinolin-1(2H)-yl)-2-nitroethan-1-one MDA-MB-231 C415(0.50)  LDD2112  [1]
 LDCM0497  Nucleophilic fragment 11b MDA-MB-231 C415(0.93)  LDD2090  [1]
 LDCM0512  Nucleophilic fragment 19a MDA-MB-231 C415(0.92)  LDD2105  [1]
 LDCM0515  Nucleophilic fragment 20b MDA-MB-231 C415(0.36)  LDD2108  [1]

References

1 Nucleophilic covalent ligand discovery for the cysteine redoxome. Nat Chem Biol. 2023 Nov;19(11):1309-1319. doi: 10.1038/s41589-023-01330-5. Epub 2023 May 29.
Mass spectrometry data entry: PXD039908 , PXD029761