General Information of Target

Target ID LDTP00215
Target Name Rho-related GTP-binding protein RhoD (RHOD)
Gene Name RHOD
Gene ID 29984
Synonyms
ARHD; Rho-related GTP-binding protein RhoD; Rho-related protein HP1; RhoHP1
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV
KGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK
KVPIIVVGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH
AVFQEAAEVALSSRGRNFWRRITQGFCVVT
Target Bioclass
Enzyme
Family
Small GTPase superfamily, Rho family
Subcellular location
Cell membrane
Function
Involved in endosome dynamics. May coordinate membrane transport with the function of the cytoskeleton. Involved in the internalization and trafficking of activated tyrosine kinase receptors such as PDGFRB. Participates in the reorganization of actin cytoskeleton; the function seems to involve WHAMM and includes regulation of filopodia formation and actin filament bundling. Can modulate the effect of DAPK3 in reorganization of actin cytoskeleton and focal adhesion dissolution.
Uniprot ID
O00212
Ensemble ID
ENST00000308831.7
HGNC ID
HGNC:670

Probe(s) Labeling This Target

ABPP Probe
Click To Hide/Show 7 Probe Related to This Target
Probe name Structure Binding Site(Ratio) Interaction ID Ref
STPyne
 Probe Info 
K121(10.00)  LDD0277  [1]
DBIA
 Probe Info 
C119(1.63)  LDD3312  [2]
IA-alkyne
 Probe Info 
N.A.  LDD0162  [3]
IPM
 Probe Info 
N.A.  LDD0025  [4]
JW-RF-010
 Probe Info 
N.A.  LDD0026  [4]
TFBX
 Probe Info 
C171(0.00); C28(0.00)  LDD0027  [4]
NAIA_5
 Probe Info 
C129(0.00); C171(0.00); C28(0.00)  LDD2223  [5]

Competitor(s) Related to This Target

Competitor ID Name Cell line Binding Site(Ratio) Interaction ID Ref
 LDCM0632  CL-Sc Hep-G2 C171(1.80)  LDD2227  [5]
 LDCM0022  KB02 A2780 C119(1.56)  LDD2254  [2]
 LDCM0023  KB03 A2780 C119(2.55)  LDD2671  [2]
 LDCM0024  KB05 HMCB C119(1.63)  LDD3312  [2]

References

1 A Paal-Knorr agent for chemoproteomic profiling of targets of isoketals in cells. Chem Sci. 2021 Oct 15;12(43):14557-14563. doi: 10.1039/d1sc02230j. eCollection 2021 Nov 10.
Mass spectrometry data entry: PXD028270
2 DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell. 2024 May 9;187(10):2536-2556.e30. doi: 10.1016/j.cell.2024.03.027. Epub 2024 Apr 22.
Mass spectrometry data entry: PXD047840
3 SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*. Chembiochem. 2021 May 14;22(10):1841-1851. doi: 10.1002/cbic.202000870. Epub 2021 Feb 18.
Mass spectrometry data entry: PXD023056 , PXD023059 , PXD023058 , PXD023057 , PXD023060
4 Chemoproteomic Profiling by Cysteine Fluoroalkylation Reveals Myrocin G as an Inhibitor of the Nonhomologous End Joining DNA Repair Pathway. J Am Chem Soc. 2021 Dec 8;143(48):20332-20342. doi: 10.1021/jacs.1c09724. Epub 2021 Nov 24.
Mass spectrometry data entry: PXD029255
5 N-Acryloylindole-alkyne (NAIA) enables imaging and profiling new ligandable cysteines and oxidized thiols by chemoproteomics. Nat Commun. 2023 Jun 15;14(1):3564. doi: 10.1038/s41467-023-39268-w.
Mass spectrometry data entry: PXD041264