General Information of Probe

Probe ID
LDPC0521
Probe Name
C291
Probe Type
PAL-AfBPP Probe
Structure
2D MOL
Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 313.379
Lipid-water partition coefficient (xlogp) 0.0079
Rotatable Bond Count (rotbonds) 9
Hydrogen Bond Donor Count (hbonddonor) 2
Hydrogen Bond Acceptor Count (hbondacc) 6
Chemical Identifiers
Formula
C13H19N3O4S
Canonical SMILES
[H]C#CC([H])([H])C([H])([H])C1(C([H])([H])C([H])([H])C(=O)N([H])C2(C([H])([H])C([H])([H])O[H])C([H])([H])S(=O)(=O)C2([H])[H])N=N1
InChI
InChI=1S/C13H19N3O4S/c1-2-3-5-13(15-16-13)6-4-11(18)14-12(7-8-17)9-21(19,20)10-12/h1,17H,3-10H2,(H,14,18)
InChIKey
MRHOGMPHRFGMNR-UHFFFAOYSA-N

The Probe Interaction Atlas

Target(s) List of this Probe

1 Other Labeled by This Probe
Target Name Target ID Binding Site(Ratio) Interaction ID
p53 and DNA damage-regulated protein 1 (PDRG1) LDTP16099 4.92  LDD1961 
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Full Information of The Labelling Profiles of This Probe

Quantification: AfBPP Probe vs Negative Probe
  
Experiment 1 Reporting the Labelling Profiles of This Probe
REF [1]
Probe concentration
Probe:50uM; negative probe:50uM
Quantitative Method
TMT
In Vitro Experiment Model
Model Type
Living cell
Derived Tissue
Peripheral blood
Disease Model
Normal
Model Name
Human normal cells (HEK-293T)
Note
Negative probe:C#CCCC1(CCC(NC)=O)N=N1
Interaction Atlas ID

References

1 Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells. Science. 2024 Apr 26;384(6694):eadk5864. doi: 10.1126/science.adk5864. Epub 2024 Apr 26.
Mass spectrometry data entry: PXD041587